Fix Codacy Warnings (#477)

---------

Co-authored-by: Dario Coscia <dariocos99@gmail.com>
This commit is contained in:
Filippo Olivo
2025-03-10 15:38:45 +01:00
committed by Nicola Demo
parent e3790e049a
commit 4177bfbb50
157 changed files with 3473 additions and 3839 deletions

View File

@@ -15,30 +15,21 @@
import sys
import os
import sphinx_rtd_theme
import pina
import importlib.metadata
# -- Project information -----------------------------------------------------
project = pina.__project__
copyright = pina.__copyright__
author = pina.__author__
version = pina.__version__
_DISTRIBUTION_METADATA = importlib.metadata.metadata('pina-mathlab')
project = _DISTRIBUTION_METADATA['Name']
copyright = _DISTRIBUTION_METADATA['License-File']
author = "PINA contributors"
version = _DISTRIBUTION_METADATA['Version']
sys.path.insert(0, os.path.abspath('../sphinx_extensions')) # extension to remove paramref link from lightinig
# -- General configuration ------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
# needs_sphinx = '1.4'
# if needs_sphinx > sphinx.__display_version__:
# message = 'This project needs at least Sphinx
# v{0!s}'.format(needs_sphinx)
# raise VersionRequirementError(message)
# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.autodoc',
'sphinx.ext.autosummary',
@@ -79,16 +70,16 @@ intersphinx_mapping = {
nitpicky = True
nitpick_ignore = [
('py:meth', 'lightning.pytorch.core.module.LightningModule.log'),
('py:meth', 'lightning.pytorch.core.module.LightningModule.log_dict'),
('py:exc', 'MisconfigurationException'),
('py:func', 'torch.inference_mode'),
('py:func', 'torch.no_grad'),
('py:class', 'torch.utils.data.DistributedSampler'),
('py:class', 'pina.model.layers.convolution.BaseContinuousConv'),
('py:class', 'Module'),
('py:class', 'torch.nn.modules.loss._Loss'), # TO FIX
('py:class', 'torch.optim.LRScheduler'), # TO FIX
# ('py:meth', 'lightning.pytorch.core.module.LightningModule.log'),
# ('py:meth', 'lightning.pytorch.core.module.LightningModule.log_dict'),
# ('py:exc', 'MisconfigurationException'),
# ('py:func', 'torch.inference_mode'),
# ('py:func', 'torch.no_grad'),
# ('py:class', 'torch.utils.data.DistributedSampler'),
# ('py:class', 'pina.model.layers.convolution.BaseContinuousConv'),
# ('py:class', 'Module'),
# ('py:class', 'torch.nn.modules.loss._Loss'), # TO FIX
# ('py:class', 'torch.optim.LRScheduler'), # TO FIX
]
@@ -101,27 +92,15 @@ templates_path = ['_templates']
# source_suffix = ['.rst', '.md']
source_suffix = '.rst'
# The encoding of source files.
# source_encoding = 'utf-8-sig'
# The master toctree document.
master_doc = 'index'
# General information about the project.
project = pina.__project__
copyright = pina.__copyright__
author = pina.__author__
# autoclass
autoclass_content = 'both'
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = pina.__version__
# The full version, including alpha/beta/rc tags.
release = version
# The language for content autogenerated by Sphinx. Refer to documentation
@@ -131,20 +110,10 @@ release = version
# Usually you set "language" from the command line for these cases.
language = 'en'
# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
# today = ''
# Else, today_fmt is used as the format for a strftime call.
# today_fmt = '%B %d, %Y'
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = []
# The reST default role (used for this markup: `text`) to use for all
# documents.
# default_role = None
# If true, '()' will be appended to :func: etc. cross-reference text.
add_function_parentheses = True
@@ -152,10 +121,6 @@ add_function_parentheses = True
# unit titles (such as .. function::).
add_module_names = False
# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
# show_authors = False
# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'
@@ -188,13 +153,6 @@ html_theme = 'pydata_sphinx_theme'
# Add any paths that contain custom themes here, relative to this directory.
html_theme_path = [sphinx_rtd_theme.get_html_theme_path()]
# The name for this set of Sphinx documents. If None, it defaults to
# "<project> v<release> documentation".
# html_title = None
# A shorter title for the navigation bar. Default is the same as html_title.
# html_short_title = None
# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
html_logo = "index_files/PINA_logo.png"
@@ -225,77 +183,19 @@ html_theme_options = {
"header_links_before_dropdown": 8,
}
# The name of an image file (within the static path) to use as favicon of the
# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
# html_favicon = None
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']
html_css_files = [
'/css/custom.css',
]
# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
# html_extra_path = ['_tutorial']
# If not ''i, a 'Last updated on:' timestamp is inserted at every page bottom,
# using the given strftime format.
html_last_updated_fmt = '%b %d, %Y'
# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
# html_use_smartypants = True
# Custom sidebar templates, maps document names to template names.
# html_sidebars = {}
# Additional templates that should be rendered to pages, maps page names to
# template names.
# html_additional_pages = {}
# If false, no module index is generated.
# html_domain_indices = True
# If false, no index is generated.
html_use_index = True
# If true, the index is split into individual pages for each letter.
# html_split_index = False
# If true, links to the reST sources are added to the pages.
html_show_sourcelink = True
# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
# html_show_sphinx = True
# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
html_show_copyright = True
# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
# html_use_opensearch = ''
# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None
# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
# 'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja'
# 'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr'
# html_search_language = 'en'
# A dictionary with options for the search language support, empty by default.
# Now only 'ja' uses this config value
# html_search_options = {'type': 'default'}
# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
# html_search_scorer = 'scorer.js'
# Output file base name for HTML help builder.
htmlhelp_basename = 'pinadoc'
@@ -323,27 +223,6 @@ latex_documents = [
u'PINA contributors', 'manual'),
]
# The name of an image file (relative to this directory) to place at the top of
# the title page.
# latex_logo = None
# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
# latex_use_parts = False
# If true, show page references after internal links.
# latex_show_pagerefs = False
# If true, show URL addresses after external links.
# latex_show_urls = False
# Documents to append as an appendix to all manuals.
# latex_appendices = []
# If false, no module index is generated.
# latex_domain_indices = True
# -- Options for manual page output ---------------------------------------
# One entry per manual page. List of tuples
@@ -353,10 +232,6 @@ man_pages = [
[author], 1)
]
# If true, show URL addresses after external links.
# man_show_urls = False
# -- Options for Texinfo output -------------------------------------------
# Grouping the document tree into Texinfo files. List of tuples
@@ -368,15 +243,6 @@ texinfo_documents = [
'Miscellaneous'),
]
# Documents to append as an appendix to all manuals.
# texinfo_appendices = []
# If false, no module index is generated.
# texinfo_domain_indices = True
# How to display URL addresses: 'footnote', 'no', or 'inline'.
# texinfo_show_urls = 'footnote'
# If true, do not generate a @detailmenu in the "Top" node's menu.
# texinfo_no_detailmenu = False
autodoc_member_order = 'bysource'