update rsts
This commit is contained in:
Dario Coscia
committed by
Nicola Demo
Nicola Demo
parent
b15e4c47c3
commit
d411543b76
@@ -12,22 +12,39 @@ The high-level structure of the package is depicted in our API.
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The pipeline to solve differential equations with PINA follows just five steps:
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1. Define the `Problem`_ the user aim to solve
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2. Generate data using built in `Geometries`_, or load high level simulation results as :doc:`LabelTensor <label_tensor>`
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2. Generate data using built in `Domains`_, or load high level simulation results as :doc:`LabelTensor <label_tensor>`
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3. Choose or build one or more `Models`_ to solve the problem
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4. Choose a solver across PINA available `Solvers`_, or build one using the :doc:`SolverInterface <solvers/solver_interface>`
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5. Train the model with the PINA :doc:`Trainer <solvers/solver_interface>`, enhance the train with `Callbacks`_
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5. Train the model with the PINA :doc:`Trainer <solvers/solver_interface>`, enhance the train with `Callback`_
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PINA Features
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--------------
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Training and Datamodules
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-------------------------
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.. toctree::
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:titlesonly:
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Trainer <trainer.rst>
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Data Types
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------------
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.. toctree::
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:titlesonly:
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LabelTensor <label_tensor.rst>
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Condition <condition.rst>
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Trainer <trainer.rst>
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Plotter <plotter.rst>
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Conditions
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-------------
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.. toctree::
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:titlesonly:
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ConditionInterface <condition/condition_interface.rst>
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Condition <condition/condition.rst>
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DataCondition <condition/data_condition.rst>
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DomainEquationCondition <condition/domain_equation_condition.rst>
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InputEquationCondition <condition/input_equation_condition.rst>
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InputTargetCondition <condition/input_target_condition.rst>
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Solvers
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--------------
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@@ -91,19 +108,19 @@ Adaptive Activation Functions
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.. toctree::
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:titlesonly:
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Adaptive Function Interface <adaptive_functions/AdaptiveFunctionInterface.rst>
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Adaptive ReLU <adaptive_functions/AdaptiveReLU.rst>
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Adaptive Sigmoid <adaptive_functions/AdaptiveSigmoid.rst>
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Adaptive Tanh <adaptive_functions/AdaptiveTanh.rst>
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Adaptive SiLU <adaptive_functions/AdaptiveSiLU.rst>
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Adaptive Mish <adaptive_functions/AdaptiveMish.rst>
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Adaptive ELU <adaptive_functions/AdaptiveELU.rst>
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Adaptive CELU <adaptive_functions/AdaptiveCELU.rst>
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Adaptive GELU <adaptive_functions/AdaptiveGELU.rst>
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Adaptive Softmin <adaptive_functions/AdaptiveSoftmin.rst>
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Adaptive Softmax <adaptive_functions/AdaptiveSoftmax.rst>
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Adaptive SIREN <adaptive_functions/AdaptiveSIREN.rst>
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Adaptive Exp <adaptive_functions/AdaptiveExp.rst>
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Adaptive Function Interface <adaptive_function/AdaptiveFunctionInterface.rst>
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Adaptive ReLU <adaptive_function/AdaptiveReLU.rst>
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Adaptive Sigmoid <adaptive_function/AdaptiveSigmoid.rst>
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Adaptive Tanh <adaptive_function/AdaptiveTanh.rst>
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Adaptive SiLU <adaptive_function/AdaptiveSiLU.rst>
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Adaptive Mish <adaptive_function/AdaptiveMish.rst>
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Adaptive ELU <adaptive_function/AdaptiveELU.rst>
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Adaptive CELU <adaptive_function/AdaptiveCELU.rst>
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Adaptive GELU <adaptive_function/AdaptiveGELU.rst>
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Adaptive Softmin <adaptive_function/AdaptiveSoftmin.rst>
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Adaptive Softmax <adaptive_function/AdaptiveSoftmax.rst>
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Adaptive SIREN <adaptive_function/AdaptiveSIREN.rst>
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Adaptive Exp <adaptive_function/AdaptiveExp.rst>
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Equations and Operators
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@@ -127,38 +144,39 @@ Problem
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TimeDependentProblem <problem/timedepproblem.rst>
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ParametricProblem <problem/parametricproblem.rst>
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Geometries
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Domains
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-----------------
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.. toctree::
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:titlesonly:
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Location <geometry/location.rst>
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CartesianDomain <geometry/cartesian.rst>
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EllipsoidDomain <geometry/ellipsoid.rst>
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SimplexDomain <geometry/simplex.rst>
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Domain <domain/domain.rst>
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CartesianDomain <domain/cartesian.rst>
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EllipsoidDomain <domain/ellipsoid.rst>
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SimplexDomain <domain/simplex.rst>
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Geometry set operations
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domain set operations
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------------------------
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.. toctree::
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:titlesonly:
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OperationInterface <geometry/operation_interface.rst>
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Union <geometry/union_domain.rst>
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Intersection <geometry/intersection_domain.rst>
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Difference <geometry/difference_domain.rst>
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Exclusion <geometry/exclusion_domain.rst>
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OperationInterface <domain/operation_interface.rst>
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Union <domain/union_domain.rst>
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Intersection <domain/intersection_domain.rst>
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Difference <domain/difference_domain.rst>
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Exclusion <domain/exclusion_domain.rst>
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Callbacks
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Callback
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--------------------
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.. toctree::
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:titlesonly:
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Processing Callbacks <callbacks/processing_callbacks.rst>
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Optimizer Callbacks <callbacks/optimizer_callbacks.rst>
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Adaptive Refinment Callback <callbacks/adaptive_refinment_callbacks.rst>
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Processing callback <callback/processing_callback.rst>
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Optimizer callback <callback/optimizer_callback.rst>
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Refinment callback <callback/adaptive_refinment_callback.rst>
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Weighting callback <callback/linear_weight_update_callback.rst>
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Metrics and Losses
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--------------------
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@@ -1,9 +0,0 @@
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AdaptiveCELU
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============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveCELU
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveELU
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===========
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveELU
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveExp
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===========
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveExp
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,8 +0,0 @@
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AdaptiveActivationFunctionInterface
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=======================================
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.. currentmodule:: pina.adaptive_functions.adaptive_func_interface
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.. automodule:: pina.adaptive_functions.adaptive_func_interface
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:members:
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:show-inheritance:
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@@ -1,9 +0,0 @@
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AdaptiveGELU
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============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveGELU
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveMish
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============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveMish
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveReLU
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============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveReLU
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveSIREN
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=============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveSIREN
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveSiLU
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============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveSiLU
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveSigmoid
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===============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveSigmoid
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveSoftmax
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===============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveSoftmax
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveSoftmin
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===============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveSoftmin
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -1,9 +0,0 @@
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AdaptiveTanh
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============
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.. currentmodule:: pina.adaptive_functions.adaptive_func
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.. autoclass:: AdaptiveTanh
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:members:
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:show-inheritance:
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:inherited-members: AdaptiveActivationFunctionInterface
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@@ -0,0 +1,7 @@
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Refinments callbacks
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=======================
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.. currentmodule:: pina.callback.adaptive_refinement_callback
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.. autoclass:: R3Refinement
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:members:
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:show-inheritance:
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@@ -0,0 +1,7 @@
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Weighting callbacks
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========================
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.. currentmodule:: pina.callback.linear_weight_update_callback
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.. autoclass:: LinearWeightUpdate
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:members:
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:show-inheritance:
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@@ -1,7 +1,7 @@
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Optimizer callbacks
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=====================
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.. currentmodule:: pina.callbacks.optimizer_callbacks
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.. currentmodule:: pina.callback.optimizer_callback
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.. autoclass:: SwitchOptimizer
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:members:
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:show-inheritance:
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@@ -1,7 +1,7 @@
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Processing callbacks
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=======================
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.. currentmodule:: pina.callbacks.processing_callbacks
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.. currentmodule:: pina.callbacks.processing_callback
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.. autoclass:: MetricTracker
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:members:
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:show-inheritance:
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@@ -1,7 +0,0 @@
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Adaptive Refinments callbacks
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===============================
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.. currentmodule:: pina.callbacks.adaptive_refinment_callbacks
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.. autoclass:: R3Refinement
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:members:
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:show-inheritance:
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@@ -1,7 +0,0 @@
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Condition
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=========
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.. currentmodule:: pina.condition
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.. autoclass:: Condition
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:members:
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:show-inheritance:
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7
docs/source/_rst/condition/condition.rst
Normal file
7
docs/source/_rst/condition/condition.rst
Normal file
@@ -0,0 +1,7 @@
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Conditions
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=============
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.. currentmodule:: pina.condition.condition
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.. autoclass:: Condition
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:members:
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:show-inheritance:
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7
docs/source/_rst/condition/condition_interface.rst
Normal file
7
docs/source/_rst/condition/condition_interface.rst
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@@ -0,0 +1,7 @@
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ConditionInterface
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======================
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.. currentmodule:: pina.condition.condition_interface
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.. autoclass:: ConditionInterface
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:members:
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:show-inheritance:
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15
docs/source/_rst/condition/data_condition.rst
Normal file
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docs/source/_rst/condition/data_condition.rst
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@@ -0,0 +1,15 @@
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Data Conditions
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==================
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.. currentmodule:: pina.condition.data_condition
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.. autoclass:: DataCondition
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:members:
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:show-inheritance:
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.. autoclass:: GraphDataCondition
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:members:
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:show-inheritance:
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.. autoclass:: TensorDataCondition
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:members:
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:show-inheritance:
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7
docs/source/_rst/condition/domain_equation_condition.rst
Normal file
7
docs/source/_rst/condition/domain_equation_condition.rst
Normal file
@@ -0,0 +1,7 @@
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Domain Equation Condition
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===========================
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.. currentmodule:: pina.condition.domain_equation_condition
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.. autoclass:: DomainEquationCondition
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:members:
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:show-inheritance:
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15
docs/source/_rst/condition/input_equation_condition.rst
Normal file
15
docs/source/_rst/condition/input_equation_condition.rst
Normal file
@@ -0,0 +1,15 @@
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Input Equation Condition
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===========================
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.. currentmodule:: pina.condition.input_equation_condition
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.. autoclass:: InputEquationCondition
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:members:
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:show-inheritance:
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.. autoclass:: InputTensorEquationCondition
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:members:
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:show-inheritance:
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.. autoclass:: InputGraphEquationCondition
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:members:
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:show-inheritance:
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23
docs/source/_rst/condition/input_target_condition.rst
Normal file
23
docs/source/_rst/condition/input_target_condition.rst
Normal file
@@ -0,0 +1,23 @@
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Input Target Condition
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===========================
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.. currentmodule:: pina.condition.input_target_condition
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.. autoclass:: InputTargetCondition
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:members:
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:show-inheritance:
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.. autoclass:: TensorInputTensorTargetCondition
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:members:
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:show-inheritance:
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.. autoclass:: TensorInputGraphTargetCondition
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:members:
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:show-inheritance:
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.. autoclass:: GraphInputTensorTargetCondition
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:members:
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:show-inheritance:
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.. autoclass:: GraphInputGraphTargetCondition
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:members:
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:show-inheritance:
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7
docs/source/_rst/data/data_module.rst
Normal file
7
docs/source/_rst/data/data_module.rst
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@@ -0,0 +1,7 @@
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PinaDataModule
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======================
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.. currentmodule:: pina.data.data_module
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.. autoclass:: PinaDataModule
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:members:
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:show-inheritance:
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7
docs/source/_rst/data/dataset.rst
Normal file
7
docs/source/_rst/data/dataset.rst
Normal file
@@ -0,0 +1,7 @@
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PinaDataset
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======================
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.. currentmodule:: pina.data.dataset
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.. autoclass:: PinaDataset
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:members:
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:show-inheritance:
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@@ -1,8 +1,8 @@
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CartesianDomain
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======================
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.. currentmodule:: pina.geometry.cartesian
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.. currentmodule:: pina.domain.cartesian
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.. automodule:: pina.geometry.cartesian
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.. automodule:: pina.domain.cartesian
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.. autoclass:: CartesianDomain
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:members:
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@@ -1,8 +1,8 @@
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Difference
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======================
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.. currentmodule:: pina.geometry.difference_domain
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.. currentmodule:: pina.domain.difference_domain
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.. automodule:: pina.geometry.difference_domain
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.. automodule:: pina.domain.difference_domain
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.. autoclass:: Difference
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:members:
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9
docs/source/_rst/domain/domain.rst
Normal file
9
docs/source/_rst/domain/domain.rst
Normal file
@@ -0,0 +1,9 @@
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Domain
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===========
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.. currentmodule:: pina.domain.domain_interface
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.. automodule:: pina.domain.domain_interface
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.. autoclass:: Domain
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:members:
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:show-inheritance:
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@@ -1,8 +1,8 @@
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EllipsoidDomain
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======================
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.. currentmodule:: pina.geometry.ellipsoid
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.. currentmodule:: pina.domain.ellipsoid
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.. automodule:: pina.geometry.ellipsoid
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.. automodule:: pina.domain.ellipsoid
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.. autoclass:: EllipsoidDomain
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:members:
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@@ -1,8 +1,8 @@
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Exclusion
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======================
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.. currentmodule:: pina.geometry.exclusion_domain
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.. currentmodule:: pina.domain.exclusion_domain
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.. automodule:: pina.geometry.exclusion_domain
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.. automodule:: pina.domain.exclusion_domain
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.. autoclass:: Exclusion
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:members:
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@@ -1,8 +1,8 @@
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Intersection
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======================
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.. currentmodule:: pina.geometry.intersection_domain
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.. currentmodule:: pina.domain.intersection_domain
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.. automodule:: pina.geometry.intersection_domain
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.. automodule:: pina.domain.intersection_domain
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.. autoclass:: Intersection
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:members:
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@@ -1,8 +1,8 @@
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OperationInterface
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======================
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.. currentmodule:: pina.geometry.operation_interface
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.. currentmodule:: pina.domain.operation_interface
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||||
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.. automodule:: pina.geometry.operation_interface
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.. automodule:: pina.domain.operation_interface
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.. autoclass:: OperationInterface
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:members:
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@@ -1,8 +1,8 @@
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SimplexDomain
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======================
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.. currentmodule:: pina.geometry.simplex
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.. currentmodule:: pina.domain.simplex
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||||
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||||
.. automodule:: pina.geometry.simplex
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.. automodule:: pina.domain.simplex
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.. autoclass:: SimplexDomain
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:members:
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@@ -1,8 +1,8 @@
|
||||
Union
|
||||
======================
|
||||
.. currentmodule:: pina.geometry.union_domain
|
||||
.. currentmodule:: pina.domain.union_domain
|
||||
|
||||
.. automodule:: pina.geometry.union_domain
|
||||
.. automodule:: pina.domain.union_domain
|
||||
|
||||
.. autoclass:: Union
|
||||
:members:
|
||||
@@ -1,9 +0,0 @@
|
||||
Location
|
||||
====================
|
||||
.. currentmodule:: pina.geometry.location
|
||||
|
||||
.. automodule:: pina.geometry.location
|
||||
|
||||
.. autoclass:: Location
|
||||
:members:
|
||||
:show-inheritance:
|
||||
@@ -9,10 +9,10 @@ Getting started with PINA
|
||||
:maxdepth: 3
|
||||
:titlesonly:
|
||||
|
||||
Introduction to PINA for Physics Informed Neural Networks training <tutorials/tutorial1/tutorial.rst>
|
||||
Introduction to PINA Equation class <tutorials/tutorial12/tutorial.rst>
|
||||
PINA and PyTorch Lightning, training tips and visualizations <tutorials/tutorial11/tutorial.rst>
|
||||
Building custom geometries with PINA Location class <tutorials/tutorial6/tutorial.rst>
|
||||
`Introduction to PINA for Physics Informed Neural Networks training <tutorials/tutorial1/tutorial.html>`_
|
||||
`Introduction to PINA Equation class <tutorials/tutorial12/tutorial.html>`_
|
||||
`PINA and PyTorch Lightning, training tips and visualizations <tutorials/tutorial11/tutorial.html>`_
|
||||
`Building custom geometries with PINA Location class <tutorials/tutorial6/tutorial.html>`_
|
||||
|
||||
|
||||
Physics Informed Neural Networks
|
||||
@@ -21,11 +21,11 @@ Physics Informed Neural Networks
|
||||
:maxdepth: 3
|
||||
:titlesonly:
|
||||
|
||||
Two dimensional Poisson problem using Extra Features Learning<tutorials/tutorial2/tutorial.rst>
|
||||
Two dimensional Wave problem with hard constraint<tutorials/tutorial3/tutorial.rst>
|
||||
Resolution of a 2D Poisson inverse problem<tutorials/tutorial7/tutorial.rst>
|
||||
Periodic Boundary Conditions for Helmotz Equation<tutorials/tutorial9/tutorial.rst>
|
||||
Multiscale PDE learning with Fourier Feature Network<tutorials/tutorial13/tutorial.rst>
|
||||
`Two dimensional Poisson problem using Extra Features Learning <tutorials/tutorial2/tutorial.html>`_
|
||||
`Two dimensional Wave problem with hard constraint <tutorials/tutorial3/tutorial.html>`_
|
||||
`Resolution of a 2D Poisson inverse problem <tutorials/tutorial7/tutorial.html>`_
|
||||
`Periodic Boundary Conditions for Helmotz Equation <tutorials/tutorial9/tutorial.html>`_
|
||||
`Multiscale PDE learning with Fourier Feature Network <tutorials/tutorial13/tutorial.html>`_
|
||||
|
||||
Neural Operator Learning
|
||||
------------------------
|
||||
@@ -33,8 +33,8 @@ Neural Operator Learning
|
||||
:maxdepth: 3
|
||||
:titlesonly:
|
||||
|
||||
Two dimensional Darcy flow using the Fourier Neural Operator<tutorials/tutorial5/tutorial.rst>
|
||||
Time dependent Kuramoto Sivashinsky equation using the Averaging Neural Operator<tutorials/tutorial10/tutorial.rst>
|
||||
`Two dimensional Darcy flow using the Fourier Neural Operator <tutorials/tutorial5/tutorial.html>`_
|
||||
`Time dependent Kuramoto Sivashinsky equation using the Averaging Neural Operator <tutorials/tutorial10/tutorial.html>`_
|
||||
|
||||
Supervised Learning
|
||||
-------------------
|
||||
@@ -42,5 +42,5 @@ Supervised Learning
|
||||
:maxdepth: 3
|
||||
:titlesonly:
|
||||
|
||||
Unstructured convolutional autoencoder via continuous convolution<tutorials/tutorial4/tutorial.rst>
|
||||
POD-RBF and POD-NN for reduced order modeling<tutorials/tutorial8/tutorial.rst>
|
||||
`Unstructured convolutional autoencoder via continuous convolution <tutorials/tutorial4/tutorial.html>`_
|
||||
`POD-RBF and POD-NN for reduced order modeling <tutorials/tutorial8/tutorial.html>`_
|
||||
|
||||
Reference in New Issue
Block a user